I ran the script found here https://www-secure.symantec.com/connect/articles/how-implement-custom-application-pools-smp-improve-web-console-performance that was released on Monday. After which my console no longer appears to work at all, some of the pages work but most of them no longer do. I tried moving these pages back to their previous application pool but that did not appear to help at all.
Any help would be greatly appreciated.
I had to change "enable 32 bit applications" to false on all the new app Pools for this to work.