Thanks so much for the response. With this information I was able to get it somewhat working. After navigating to C:\Program Files\Altiris\Altiris Agent\Agents\SoftwareManagement\Software Delivery\GUID I found the automation folder package. After doubleclicking and running the installer by hand the automation folder was there and I could boot to it. I verified on a couple machines this was the case. Oddly it won't install on any machine automatically. It just copies down to the machine and I have to run manually.
When looking for the GUID in Software Delivery tab in the Symantec Management Agent I didn't see it listed under Policies or anywhere for that matter. Here are my log.xml and package.xml files.
<Log id="{A56201E5-6615-4D4A-B6AC-F1D458AC4404}" downloadEvent="3" transferBytes="147104407" transferRate="6686563" attempts="2" successes="2" attemptTime="00:00:00">
<History>
<Download version="1320913886" status="valid" statusDescr="valid" transferBytes="147104407" packageSize="147104407">
<Session startTime="2011-11-29 10:55:34" endTime="2011-11-29 10:55:44" source="http://colligo.bowdoincollege.edu/Altiris/PS/{A56201E5-6615-4D4A-B6AC-F1D458AC4404}" transferRate="13373127" transferBytes="147104407" transferCache="0" result="0"/>
</Download>
<Download version="0" status="valid" statusDescr="Download package sources completed OK" transferBytes="0" packageSize="0">
<Session startTime="2011-11-29 10:55:26" endTime="2011-11-29 10:55:26" source="" transferRate="0" transferBytes="0" transferCache="0" result="0"/>
</Download>
</History>
</Log>
<Package id="{A56201E5-6615-4D4A-B6AC-F1D458AC4404}" name="Deployment Automation Folder (x64)" size="0" version="1320913886" remote="false" priority="Normal" status="valid" minspeed="0" enableMulticast="false" statusDescription="valid">
<Source time="2011-11-29 10:55:34" speedTest="true">
<SiteQuery url="http://inventus.bowdoin.edu/Altiris/NS/Agent/GetPackageInfo.aspx" resource="{C14EE551-C6F5-4539-B5B4-974DD306431F}" type="codebases"/>
<Codebase unc="\\colligo.bowdoincollege.edu\PkgSvrHostC$\{A56201E5-6615-4D4A-B6AC-F1D458AC4404}\cache" snapshot="\\colligo.bowdoincollege.edu\PkgSvrHostC$\{A56201E5-6615-4D4A-B6AC-F1D458AC4404}\snapshot.xml"/>
<Codebase href="http://colligo.bowdoincollege.edu/Altiris/PS/{A56201E5-6615-4D4A-B6AC-F1D458AC4404}" snapshot="http://colligo.bowdoincollege.edu/Altiris/PS/getpackagesnapshot.asp"/>
</Source>
</Package>